HL_6OGI_110

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUAAAGAGUAACGG

Length

15 nucleotides

Bulged bases

6OGI|1|1|A|2268, 6OGI|1|1|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|C|2263
6OGI|1|1|C|2264
6OGI|1|1|U|2265
6OGI|1|1|A|2266
6OGI|1|1|A|2267
6OGI|1|1|A|2268
6OGI|1|1|G|2269
6OGI|1|1|A|2270
6OGI|1|1|G|2271
6OGI|1|1|U|2272
6OGI|1|1|A|2273
6OGI|1|1|A|2274
6OGI|1|1|C|2275
6OGI|1|1|G|2276
6OGI|1|1|G|2277

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain m

50S ribosomal protein L16

Chain w

50S ribosomal protein L27