HL_6OGI_113

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|1|C|2652
6OGI|1|1|U|2653
6OGI|1|1|A|2654
6OGI|1|1|G|2655
6OGI|1|1|U|2656
6OGI|1|1|A|2657
6OGI|1|1|C|2658
6OGI|1|1|G|2659
6OGI|1|1|A|2660
6OGI|1|1|G|2661
6OGI|1|1|A|2662
6OGI|1|1|G|2663
6OGI|1|1|G|2664
6OGI|1|1|A|2665
6OGI|1|1|C|2666
6OGI|1|1|C|2667
6OGI|1|1|G|2668

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L6