3D structure

PDB id
6OGI (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUAACUCCGUGCCAGCAG
Length
18 nucleotides
Bulged bases
6OGI|1|3|C|518
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OGI|1|3|C|507
6OGI|1|3|U|508
6OGI|1|3|A|509
6OGI|1|3|A|510
6OGI|1|3|C|511
6OGI|1|3|U|512
6OGI|1|3|C|513
6OGI|1|3|C|514
6OGI|1|3|G|515
6OGI|1|3|U|516
6OGI|1|3|G|517
6OGI|1|3|C|518
6OGI|1|3|C|519
6OGI|1|3|A|520
6OGI|1|3|G|521
6OGI|1|3|C|522
6OGI|1|3|A|523
6OGI|1|3|G|524

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain 4
mRNA
Chain I
30S ribosomal protein S4
Chain Q
30S ribosomal protein S12

Coloring options:

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