HL_6OGI_135
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAGGUGUAGCGGUGAAAUGCGUAGAGAUCUG
- Length
- 31 nucleotides
- Bulged bases
- 6OGI|1|3|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|3|C|680
6OGI|1|3|A|681
6OGI|1|3|G|682
6OGI|1|3|G|683
6OGI|1|3|U|684
6OGI|1|3|G|685
6OGI|1|3|U|686
6OGI|1|3|A|687
6OGI|1|3|G|688
6OGI|1|3|C|689
6OGI|1|3|G|690
6OGI|1|3|G|691
6OGI|1|3|U|692
6OGI|1|3|G|693
6OGI|1|3|A|694
6OGI|1|3|A|695
6OGI|1|3|A|696
6OGI|1|3|U|697
6OGI|1|3|G|698
6OGI|1|3|C|699
6OGI|1|3|G|700
6OGI|1|3|U|701
6OGI|1|3|A|702
6OGI|1|3|G|703
6OGI|1|3|A|704
6OGI|1|3|G|705
6OGI|1|3|A|706
6OGI|1|3|U|707
6OGI|1|3|C|708
6OGI|1|3|U|709
6OGI|1|3|G|710
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain K
- 30S ribosomal protein S6
- Chain L
- 30S ribosomal protein S7
- Chain P
- 30S ribosomal protein S11
- Chain W
- 30S ribosomal protein S18
- Chain Z
- 30S ribosomal protein S21
- Chain b
- 50S ribosomal protein L2
Coloring options: