HL_6OIG_029

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUGAUAUGAUGC

Length

13 nucleotides

Bulged bases

6OIG|1|5|U|1356

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|G|1346
6OIG|1|5|U|1347
6OIG|1|5|U|1348
6OIG|1|5|G|1349
6OIG|1|5|A|1350
6OIG|1|5|U|1351
6OIG|1|5|A|1352
6OIG|1|5|U|1353
6OIG|1|5|G|1354
6OIG|1|5|A|1355
6OIG|1|5|U|1356
6OIG|1|5|G|1357
6OIG|1|5|C|1358

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain E

60S ribosomal protein L6-A

Chain Q

60S ribosomal protein L18-A

Chain e

60S ribosomal protein L32