HL_6OIG_053

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|G|2534
6OIG|1|5|A|2535
6OIG|1|5|A|2536
6OIG|1|5|U|2537
6OIG|1|5|U|2538
6OIG|1|5|C|2539
6OIG|1|5|A|2540
6OIG|1|5|U|2541
6OIG|1|5|U|2542
6OIG|1|5|U|2543
6OIG|1|5|U|2544
6OIG|1|5|C|2545

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain G

60S ribosomal protein L8-A

Chain g

60S ribosomal protein L34-A