HL_6OIG_082

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUUCAGUGUGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|U|2723
6OIG|1|5|U|2724
6OIG|1|5|U|2725
6OIG|1|5|C|2726
6OIG|1|5|A|2727
6OIG|1|5|G|2728
6OIG|1|5|U|2729
6OIG|1|5|G|2730
6OIG|1|5|U|2731
6OIG|1|5|G|2732
6OIG|1|5|A|2733

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Q

60S ribosomal protein L18-A

Chain T

60S ribosomal protein L21-A

Chain a

60S ribosomal protein L28

Chain b

60S ribosomal protein L29

Chain o

60S ribosomal protein L42-A