HL_6OJ2_017
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6OJ2|1|QA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_017 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.1718
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6OJ2|1|QA|G|786
6OJ2|1|QA|A|787
6OJ2|1|QA|U|788
6OJ2|1|QA|U|789
6OJ2|1|QA|A|790
6OJ2|1|QA|G|791
6OJ2|1|QA|A|792
6OJ2|1|QA|U|793
6OJ2|1|QA|A|794
6OJ2|1|QA|C|795
6OJ2|1|QA|C|796
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QK
- 30S ribosomal protein S11
- Chain QV
- Transfer RNA; tRNA
- Chain QW
- Transfer RNA; tRNA
- Chain QX
- mRNA
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: