HL_6OJ2_092

3D structure

PDB id

6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

6OJ2|1|RA|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OJ2_092 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.3151

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

6OJ2|1|RA|C|2143
6OJ2|1|RA|U|2144
6OJ2|1|RA|C|2145
6OJ2|1|RA|C|2146
6OJ2|1|RA|G|2147
6OJ2|1|RA|G|2148

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QK

30S ribosomal protein S11