HL_6OJ2_133
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 6OJ2|1|XA|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_133 not in the Motif Atlas
- Geometric match to HL_8C3A_054
- Geometric discrepancy: 0.1658
- The information below is about HL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
6OJ2|1|XA|C|962
6OJ2|1|XA|G|963
6OJ2|1|XA|A|964
6OJ2|1|XA|A|965
6OJ2|1|XA|G|966
6OJ2|1|XA|C|967
6OJ2|1|XA|A|968
6OJ2|1|XA|A|969
6OJ2|1|XA|C|970
6OJ2|1|XA|G|971
6OJ2|1|XA|C|972
6OJ2|1|XA|G|973
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XI
- 30S ribosomal protein S9
- Chain XJ
- 30S ribosomal protein S10
- Chain XM
- 30S ribosomal protein S13
- Chain XN
- 30S ribosomal protein S14 type Z
- Chain XV
- Transfer RNA; tRNA
- Chain XY
- Transfer RNA; tRNA
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