HL_6OJ2_160
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_160 not in the Motif Atlas
- Homologous match to HL_4WF9_008
- Geometric discrepancy: 0.067
- The information below is about HL_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6OJ2|1|YA|C|246
6OJ2|1|YA|G|247
6OJ2|1|YA|G|248
6OJ2|1|YA|C|249
6OJ2|1|YA|G|250
6OJ2|1|YA|A|251
6OJ2|1|YA|G|252
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XW
- Transfer RNA; tRNA
- Chain Y1
- 50S ribosomal protein L28
- Chain Y8
- 50S ribosomal protein L35
- Chain YP
- 50S ribosomal protein L15
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