HL_6OJ2_237
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUACGGG
- Length
- 8 nucleotides
- Bulged bases
- 6OJ2|1|XA|A|344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OJ2_237 not in the Motif Atlas
- Geometric match to HL_7MLW_004
- Geometric discrepancy: 0.3987
- The information below is about HL_7MLW_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83003.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6OJ2|1|XA|C|341
6OJ2|1|XA|C|342
6OJ2|1|XA|U|343
6OJ2|1|XA|A|344
6OJ2|1|XA|C|345
6OJ2|1|XA|G|346
6OJ2|1|XA|G|347
6OJ2|1|XA|G|348
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain YO
- 50S ribosomal protein L14
- Chain YT
- 50S ribosomal protein L19
Coloring options: