HL_6OLE_060

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCGCUCG

Length

8 nucleotides

Bulged bases

6OLE|1|t|G|1391, 6OLE|1|t|U|1393

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLE_060 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1659

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

6OLE|1|t|C|1388
6OLE|1|t|G|1389
6OLE|1|t|C|1390
6OLE|1|t|G|1391
6OLE|1|t|C|1392
6OLE|1|t|U|1393
6OLE|1|t|C|1394
6OLE|1|t|G|1395

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain c

60S ribosomal protein L29