HL_6OLE_072

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLE_072 not in the Motif Atlas

Homologous match to HL_5TBW_028

Geometric discrepancy: 0.5244

The information below is about HL_5TBW_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6OLE|1|t|G|1986
6OLE|1|t|U|1987
6OLE|1|t|G|1988
6OLE|1|t|U|1989
6OLE|1|t|A|1990
6OLE|1|t|A|1991
6OLE|1|t|C|1992
6OLE|1|t|A|1993
6OLE|1|t|A|1994
6OLE|1|t|C|1995

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain n

60S ribosomal protein L40