HL_6OLE_124

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

6OLE|1|S2|A|536, 6OLE|1|S2|C|537, 6OLE|1|S2|U|540, 6OLE|1|S2|U|542, 6OLE|1|S2|G|547

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|S2|G|534
6OLE|1|S2|G|535
6OLE|1|S2|A|536
6OLE|1|S2|C|537
6OLE|1|S2|U|538
6OLE|1|S2|C|539
6OLE|1|S2|U|540
6OLE|1|S2|U|541
6OLE|1|S2|U|542
6OLE|1|S2|C|543
6OLE|1|S2|G|544
6OLE|1|S2|A|545
6OLE|1|S2|G|546
6OLE|1|S2|G|547
6OLE|1|S2|C|548
6OLE|1|S2|C|549

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Se

40S ribosomal protein S30