HL_6OLF_010

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGACCCCCUUCGCGGGGGGGAUG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|C|188
6OLF|1|S2|U|189
6OLF|1|S2|G|190
6OLF|1|S2|A|191
6OLF|1|S2|C|192
6OLF|1|S2|C|193
6OLF|1|S2|C|194
6OLF|1|S2|C|195
6OLF|1|S2|C|196
6OLF|1|S2|U|197
6OLF|1|S2|U|198
6OLF|1|S2|C|199
6OLF|1|S2|G|200
6OLF|1|S2|C|201
6OLF|1|S2|G|202
6OLF|1|S2|G|203
6OLF|1|S2|G|204
6OLF|1|S2|G|205
6OLF|1|S2|G|206
6OLF|1|S2|G|207
6OLF|1|S2|G|208
6OLF|1|S2|A|209
6OLF|1|S2|U|210
6OLF|1|S2|G|211

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SI

40S ribosomal protein S8