HL_6OLF_018

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

6OLF|1|S2|A|536, 6OLF|1|S2|U|542

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|G|534
6OLF|1|S2|G|535
6OLF|1|S2|A|536
6OLF|1|S2|C|537
6OLF|1|S2|U|538
6OLF|1|S2|C|539
6OLF|1|S2|U|540
6OLF|1|S2|U|541
6OLF|1|S2|U|542
6OLF|1|S2|C|543
6OLF|1|S2|G|544
6OLF|1|S2|A|545
6OLF|1|S2|G|546
6OLF|1|S2|G|547
6OLF|1|S2|C|548
6OLF|1|S2|C|549

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Se

40S ribosomal protein S30