HL_6OLF_099
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAGG
- Length
- 5 nucleotides
- Bulged bases
- 6OLF|1|t|A|4074, 6OLF|1|t|G|4075
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLF_099 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.2932
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_90436.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 37
Unit IDs
6OLF|1|t|C|4072
6OLF|1|t|G|4073
6OLF|1|t|A|4074
6OLF|1|t|G|4075
6OLF|1|t|G|4076
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain SB
- 40S ribosomal protein S3a
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