HL_6OLF_104
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAGAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLF_104 not in the Motif Atlas
- Homologous match to HL_5TBW_057
- Geometric discrepancy: 0.1444
- The information below is about HL_5TBW_057
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
6OLF|1|t|C|4232
6OLF|1|t|A|4233
6OLF|1|t|G|4234
6OLF|1|t|A|4235
6OLF|1|t|A|4236
6OLF|1|t|G|4237
6OLF|1|t|G|4238
6OLF|1|t|G|4239
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L10
- Chain U
- 60S ribosomal protein L21
- Chain p
- 60S ribosomal protein L36a
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