HL_6OLF_126
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCAAGUCUGG(PSU)GCCAGCAGC
- Length
- 21 nucleotides
- Bulged bases
- 6OLF|1|S2|U|607, 6OLF|1|S2|C|614
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|S2|G|601
6OLF|1|S2|G|602
6OLF|1|S2|C|603
6OLF|1|S2|A|604
6OLF|1|S2|A|605
6OLF|1|S2|G|606
6OLF|1|S2|U|607
6OLF|1|S2|C|608
6OLF|1|S2|U|609
6OLF|1|S2|G|610
6OLF|1|S2|G|611
6OLF|1|S2|PSU|612
6OLF|1|S2|G|613
6OLF|1|S2|C|614
6OLF|1|S2|C|615
6OLF|1|S2|A|616
6OLF|1|S2|G|617
6OLF|1|S2|C|618
6OLF|1|S2|A|619
6OLF|1|S2|G|620
6OLF|1|S2|C|621
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SD
- 40S ribosomal protein S3
- Chain SJ
- 40S ribosomal protein S9
- Chain SX
- 40S ribosomal protein S23
- Chain Se
- 40S ribosomal protein S30
- Chain u
- Transfer RNA; tRNA
- Chain w
- mRNA
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