HL_6OLF_127

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACAGAUUGAUAGCUCUUU

Length

18 nucleotides

Bulged bases

6OLF|1|S2|U|1297, 6OLF|1|S2|U|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|A|1291
6OLF|1|S2|C|1292
6OLF|1|S2|A|1293
6OLF|1|S2|G|1294
6OLF|1|S2|A|1295
6OLF|1|S2|U|1296
6OLF|1|S2|U|1297
6OLF|1|S2|G|1298
6OLF|1|S2|A|1299
6OLF|1|S2|U|1300
6OLF|1|S2|A|1301
6OLF|1|S2|G|1302
6OLF|1|S2|C|1303
6OLF|1|S2|U|1304
6OLF|1|S2|C|1305
6OLF|1|S2|U|1306
6OLF|1|S2|U|1307
6OLF|1|S2|U|1308

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain Sd

40S ribosomal protein S29

Chain Sf

40S ribosomal protein S27a