HL_6OLG_017
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUCGCACGAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6OLG|1|A2|A|1354
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLG_017 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3405
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6OLG|1|A2|C|1346
6OLG|1|A2|U|1347
6OLG|1|A2|C|1348
6OLG|1|A2|G|1349
6OLG|1|A2|C|1350
6OLG|1|A2|A|1351
6OLG|1|A2|C|1352
6OLG|1|A2|G|1353
6OLG|1|A2|A|1354
6OLG|1|A2|A|1355
6OLG|1|A2|A|1356
6OLG|1|A2|G|1357
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AC
- 60S ribosomal protein L4
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain AY
- 60S ribosomal protein L26
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