HL_6OLG_062
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLG_062 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.3472
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OLG|1|A2|U|4263
6OLG|1|A2|U|4264
6OLG|1|A2|C|4265
6OLG|1|A2|A|4266
6OLG|1|A2|G|4267
6OLG|1|A2|U|4268
6OLG|1|A2|A|4269
6OLG|1|A2|C|4270
6OLG|1|A2|G|4271
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AQ
- 60S ribosomal protein L18
- Chain AT
- 60S ribosomal protein L21
- Chain Aa
- 60S ribosomal protein L27a
- Chain Ao
- 60S ribosomal protein L36a
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