HL_6OLG_090
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 6OLG|1|B1|A|448, 6OLG|1|B1|C|450, 6OLG|1|B1|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLG_090 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1587
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6OLG|1|B1|C|441
6OLG|1|B1|C|442
6OLG|1|B1|U|443
6OLG|1|B1|G|444
6OLG|1|B1|A|445
6OLG|1|B1|G|446
6OLG|1|B1|A|447
6OLG|1|B1|A|448
6OLG|1|B1|A|449
6OLG|1|B1|C|450
6OLG|1|B1|G|451
6OLG|1|B1|G|452
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4, Y isoform 1
- Chain BG
- 40S ribosomal protein S6
- Chain BI
- 40S ribosomal protein S8
- Chain BY
- 40S ribosomal protein S24
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