HL_6OLI_002
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 6OLI|1|D|A|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLI_002 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.4759
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6OLI|1|D|G|68
6OLI|1|D|U|69
6OLI|1|D|G|70
6OLI|1|D|A|71
6OLI|1|D|A|72
6OLI|1|D|U|73
6OLI|1|D|U|74
6OLI|1|D|G|75
6OLI|1|D|C|76
6OLI|1|D|A|77
6OLI|1|D|G|78
6OLI|1|D|G|79
6OLI|1|D|A|80
6OLI|1|D|C|81
6OLI|1|D|A|82
6OLI|1|D|C|83
6OLI|1|D|A|84
6OLI|1|D|U|85
6OLI|1|D|U|86
6OLI|1|D|G|87
6OLI|1|D|A|88
6OLI|1|D|U|89
6OLI|1|D|C|90
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Z
- 60S ribosomal protein L26
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain m
- 60S ribosomal protein L39
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: