HL_6OLI_006
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLI_006 not in the Motif Atlas
- Homologous match to HL_5TBW_186
- Geometric discrepancy: 0.1225
- The information below is about HL_5TBW_186
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
6OLI|1|E|G|86
6OLI|1|E|G|87
6OLI|1|E|A|88
6OLI|1|E|G|89
6OLI|1|E|A|90
6OLI|1|E|C|91
Current chains
- Chain E
- 5S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L7
- Chain K
- 60S ribosomal protein L10
- Chain T
- 60S ribosomal protein L18a
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: