HL_6OLI_095
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 6OLI|1|t|A|3731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLI_095 not in the Motif Atlas
- Homologous match to HL_5TBW_049
- Geometric discrepancy: 0.1194
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6OLI|1|t|G|3728
6OLI|1|t|U|3729
6OLI|1|t|A|3730
6OLI|1|t|A|3731
6OLI|1|t|C|3732
6OLI|1|t|U|3733
6OLI|1|t|A|3734
6OLI|1|t|U|3735
6OLI|1|t|G|3736
6OLI|1|t|A|3737
6OLI|1|t|C|3738
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain u
- Transfer RNA; tRNA
- Chain w
- mRNA
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