HL_6OLZ_024

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

6OLZ|1|A2|A|1612, 6OLZ|1|A2|G|1615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_024 not in the Motif Atlas

Homologous match to HL_5TBW_021

Geometric discrepancy: 0.1793

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OLZ|1|A2|G|1609
6OLZ|1|A2|C|1610
6OLZ|1|A2|G|1611
6OLZ|1|A2|A|1612
6OLZ|1|A2|A|1613
6OLZ|1|A2|A|1614
6OLZ|1|A2|G|1615
6OLZ|1|A2|A|1616
6OLZ|1|A2|C|1617

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L8

Chain AN

60S ribosomal protein L15

Chain Aj

60S ribosomal protein L37