HL_6OLZ_046

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGAACAG

Length

7 nucleotides

Bulged bases

6OLZ|1|A2|C|2793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_046 not in the Motif Atlas

Homologous match to HL_5TBW_042

Geometric discrepancy: 0.1372

The information below is about HL_5TBW_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6OLZ|1|A2|U|2789
6OLZ|1|A2|G|2790
6OLZ|1|A2|A|2791
6OLZ|1|A2|A|2792
6OLZ|1|A2|C|2793
6OLZ|1|A2|A|2794
6OLZ|1|A2|G|2795

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AR

60S ribosomal protein L19