HL_6OLZ_054

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

6OLZ|1|A2|U|3773

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_054 not in the Motif Atlas

Homologous match to HL_5TBW_050

Geometric discrepancy: 0.1921

The information below is about HL_5TBW_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

6OLZ|1|A2|U|3767
6OLZ|1|A2|C|3768
6OLZ|1|A2|U|3769
6OLZ|1|A2|A|3770
6OLZ|1|A2|A|3771
6OLZ|1|A2|U|3772
6OLZ|1|A2|U|3773
6OLZ|1|A2|A|3774
6OLZ|1|A2|G|3775

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AV

60S ribosomal protein L23

Chain B1

Small subunit ribosomal RNA; SSU rRNA