HL_6OLZ_074

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

6OLZ|1|A2|C|4981, 6OLZ|1|A2|U|4984, 6OLZ|1|A2|C|4985

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_074 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3935

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6OLZ|1|A2|C|4979
6OLZ|1|A2|U|4980
6OLZ|1|A2|C|4981
6OLZ|1|A2|C|4982
6OLZ|1|A2|C|4983
6OLZ|1|A2|U|4984
6OLZ|1|A2|C|4985
6OLZ|1|A2|G|4986

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain BI

40S ribosomal protein S8