HL_6OLZ_112

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

6OLZ|1|B1|U|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_112 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.2516

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

6OLZ|1|B1|C|1460
6OLZ|1|B1|G|1461
6OLZ|1|B1|U|1462
6OLZ|1|B1|U|1463
6OLZ|1|B1|C|1464
6OLZ|1|B1|A|1465
6OLZ|1|B1|G|1466

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BR

40S ribosomal protein S17

Chain Bc

40S ribosomal protein S28

Chain Bg

Receptor of activated protein C kinase 1