HL_6OM6_048
3D structure
- PDB id
- 6OM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(PSU)AACUA(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 6OM6|1|1|A|1913
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM6_048 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.1001
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OM6|1|1|G|1910
6OM6|1|1|PSU|1911
6OM6|1|1|A|1912
6OM6|1|1|A|1913
6OM6|1|1|C|1914
6OM6|1|1|U|1915
6OM6|1|1|A|1916
6OM6|1|1|PSU|1917
6OM6|1|1|A|1918
6OM6|1|1|A|1919
6OM6|1|1|C|1920
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
Coloring options: