HL_6OM7_024
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAUUUUGUUGGUUUUCGG
- Length
- 19 nucleotides
- Bulged bases
- 6OM7|1|S2|G|891, 6OM7|1|S2|U|892, 6OM7|1|S2|G|895, 6OM7|1|S2|U|899
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_024 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3848
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OM7|1|S2|C|884
6OM7|1|S2|U|885
6OM7|1|S2|A|886
6OM7|1|S2|U|887
6OM7|1|S2|U|888
6OM7|1|S2|U|889
6OM7|1|S2|U|890
6OM7|1|S2|G|891
6OM7|1|S2|U|892
6OM7|1|S2|U|893
6OM7|1|S2|G|894
6OM7|1|S2|G|895
6OM7|1|S2|U|896
6OM7|1|S2|U|897
6OM7|1|S2|U|898
6OM7|1|S2|U|899
6OM7|1|S2|C|900
6OM7|1|S2|G|901
6OM7|1|S2|G|902
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SL
- 40S ribosomal protein S11
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