HL_6OM7_025

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGGUGAAAUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|S2|G|956
6OM7|1|S2|A|957
6OM7|1|S2|G|958
6OM7|1|S2|G|959
6OM7|1|S2|U|960
6OM7|1|S2|G|961
6OM7|1|S2|A|962
6OM7|1|S2|A|963
6OM7|1|S2|A|964
6OM7|1|S2|U|965
6OM7|1|S2|U|966
6OM7|1|S2|C|967

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SO

40S ribosomal protein S14

Chain t

Large subunit ribosomal RNA; LSU rRNA

Chain w

mRNA