HL_6OM7_033

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAGCGAUUU

Length

10 nucleotides

Bulged bases

6OM7|1|S2|A|1357

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|S2|G|1351
6OM7|1|S2|G|1352
6OM7|1|S2|A|1353
6OM7|1|S2|G|1354
6OM7|1|S2|C|1355
6OM7|1|S2|G|1356
6OM7|1|S2|A|1357
6OM7|1|S2|U|1358
6OM7|1|S2|U|1359
6OM7|1|S2|U|1360

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SA

40S ribosomal protein SA

Chain SC

40S ribosomal protein S2

Chain SE

40S ribosomal protein S4, X isoform

Chain SF

40S ribosomal protein S5

Chain SJ

40S ribosomal protein S9