HL_6OM7_064

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

6OM7|1|t|C|1467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OM7_064 not in the Motif Atlas

Geometric match to HL_5J7L_200

Geometric discrepancy: 0.2903

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6OM7|1|t|G|1461
6OM7|1|t|C|1462
6OM7|1|t|C|1463
6OM7|1|t|G|1464
6OM7|1|t|C|1465
6OM7|1|t|G|1466
6OM7|1|t|C|1467
6OM7|1|t|C|1468

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain M

60S ribosomal protein L13

Chain j

60S ribosomal protein L36