3D structure

PDB id
6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GUGUAACAAC
Length
10 nucleotides
Bulged bases
6OM7|1|t|A|1990
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OM7_074 not in the Motif Atlas
Homologous match to HL_5TBW_028
Geometric discrepancy: 0.5336
The information below is about HL_5TBW_028
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.2
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
14

Unit IDs

6OM7|1|t|G|1986
6OM7|1|t|U|1987
6OM7|1|t|G|1988
6OM7|1|t|U|1989
6OM7|1|t|A|1990
6OM7|1|t|A|1991
6OM7|1|t|C|1992
6OM7|1|t|A|1993
6OM7|1|t|A|1994
6OM7|1|t|C|1995

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain n
60S ribosomal protein L40

Coloring options:


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