HL_6OM7_101

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCCCGGCC

Length

8 nucleotides

Bulged bases

6OM7|1|t|C|4107

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OM7_101 not in the Motif Atlas

Geometric match to HL_4V9F_021

Geometric discrepancy: 0.2959

The information below is about HL_4V9F_021

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6OM7|1|t|G|4104
6OM7|1|t|C|4105
6OM7|1|t|C|4106
6OM7|1|t|C|4107
6OM7|1|t|G|4108
6OM7|1|t|G|4109
6OM7|1|t|C|4110
6OM7|1|t|C|4111

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain a

60S ribosomal protein L27