HL_6OM7_127

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGACUCUUUCGAGGCC

Length

16 nucleotides

Bulged bases

6OM7|1|S2|A|536, 6OM7|1|S2|U|540, 6OM7|1|S2|U|542, 6OM7|1|S2|G|547

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|S2|G|534
6OM7|1|S2|G|535
6OM7|1|S2|A|536
6OM7|1|S2|C|537
6OM7|1|S2|U|538
6OM7|1|S2|C|539
6OM7|1|S2|U|540
6OM7|1|S2|U|541
6OM7|1|S2|U|542
6OM7|1|S2|C|543
6OM7|1|S2|G|544
6OM7|1|S2|A|545
6OM7|1|S2|G|546
6OM7|1|S2|G|547
6OM7|1|S2|C|548
6OM7|1|S2|C|549

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain Se

40S ribosomal protein S30