HL_6OM7_130

3D structure

PDB id

6OM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGAUUGAUAGCUCU

Length

14 nucleotides

Bulged bases

6OM7|1|S2|U|1296, 6OM7|1|S2|U|1297, 6OM7|1|S2|U|1300

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OM7|1|S2|A|1293
6OM7|1|S2|G|1294
6OM7|1|S2|A|1295
6OM7|1|S2|U|1296
6OM7|1|S2|U|1297
6OM7|1|S2|G|1298
6OM7|1|S2|A|1299
6OM7|1|S2|U|1300
6OM7|1|S2|A|1301
6OM7|1|S2|G|1302
6OM7|1|S2|C|1303
6OM7|1|S2|U|1304
6OM7|1|S2|C|1305
6OM7|1|S2|U|1306

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SP

40S ribosomal protein S15

Chain Sd

40S ribosomal protein S29

Chain Sf

40S ribosomal protein S27a