HL_6OPE_025
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases (A, C, G, U)
- 1094G
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_025 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.1078
- The information below is about HL_4LFB_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71554.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6OPE|1|QA|G|1089
6OPE|1|QA|U|1090
6OPE|1|QA|U|1091
6OPE|1|QA|A|1092
6OPE|1|QA|A|1093
6OPE|1|QA|G|1094
6OPE|1|QA|U|1095
6OPE|1|QA|C|1096
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QB
- 30S ribosomal protein S2
- Chain QG
- 30S ribosomal protein S7
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