HL_6OPE_029
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUGCAACCCGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_029 not in the Motif Atlas
- Geometric match to HL_4V88_219
- Geometric discrepancy: 0.2763
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OPE|1|QA|U|1313
6OPE|1|QA|C|1314
6OPE|1|QA|U|1315
6OPE|1|QA|G|1316
6OPE|1|QA|C|1317
6OPE|1|QA|A|1318
6OPE|1|QA|A|1319
6OPE|1|QA|C|1320
6OPE|1|QA|C|1321
6OPE|1|QA|C|1322
6OPE|1|QA|G|1323
6OPE|1|QA|A|1324
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QM
- 30S ribosomal protein S13
- Chain QN
- 30S ribosomal protein S14 type Z
- Chain QS
- 30S ribosomal protein S19
- Chain QU
- 30S ribosomal protein Thx
- Chain R4
- 50S ribosomal protein L31
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