HL_6OPE_037
3D structure
- PDB id
- 6OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUGGCAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OPE_037 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.1258
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
6OPE|1|QY|C|31
6OPE|1|QY|U|32
6OPE|1|QY|U|33
6OPE|1|QY|G|34
6OPE|1|QY|G|35
6OPE|1|QY|C|36
6OPE|1|QY|A|37
6OPE|1|QY|A|38
6OPE|1|QY|G|39
Current chains
- Chain QY
- A-site tRNAAla(GGC) U32-A38
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QL
- 30S ribosomal protein S12
- Chain QM
- 30S ribosomal protein S13
- Chain QX
- mRNA
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
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