HL_6OPE_167

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

6OPE|1|YA|U|614, 6OPE|1|YA|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OPE_167 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.3098

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6OPE|1|YA|C|611
6OPE|1|YA|G|612
6OPE|1|YA|U|613
6OPE|1|YA|U|614
6OPE|1|YA|G|615
6OPE|1|YA|A|616
6OPE|1|YA|G|617

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4