HL_6ORD_145
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUGGCAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ORD_145 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.0719
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
6ORD|1|XY|C|31
6ORD|1|XY|U|32
6ORD|1|XY|U|33
6ORD|1|XY|G|34
6ORD|1|XY|G|35
6ORD|1|XY|C|36
6ORD|1|XY|A|37
6ORD|1|XY|A|38
6ORD|1|XY|G|39
Current chains
- Chain XY
- A-site tRNAAla(GGC) U32-A38
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XL
- 30S ribosomal protein S12
- Chain XX
- mRNA
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: