HL_6ORD_208

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_208 not in the Motif Atlas

Homologous match to HL_7RQB_062

Geometric discrepancy: 0.12

The information below is about HL_7RQB_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|YA|C|2551
6ORD|1|YA|OMU|2552
6ORD|1|YA|G|2553
6ORD|1|YA|U|2554
6ORD|1|YA|U|2555
6ORD|1|YA|C|2556
6ORD|1|YA|G|2557

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XY

Transfer RNA; tRNA