HL_6ORD_232

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

6ORD|1|RA|U|2144, 6ORD|1|RA|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_232 not in the Motif Atlas

Homologous match to HL_9DFE_049

Geometric discrepancy: 0.3583

The information below is about HL_9DFE_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORD|1|RA|C|2143
6ORD|1|RA|U|2144
6ORD|1|RA|C|2145
6ORD|1|RA|C|2146
6ORD|1|RA|G|2147
6ORD|1|RA|G|2148

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QK

30S ribosomal protein S11