HL_6ORE_088

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORE_088 not in the Motif Atlas

Homologous match to HL_5J7L_019

Geometric discrepancy: 0.0879

The information below is about HL_5J7L_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6ORE|1|2|C|862
6ORE|1|2|U|863
6ORE|1|2|A|864
6ORE|1|2|A|865
6ORE|1|2|C|866
6ORE|1|2|G|867

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain j

30S ribosomal protein S5

Chain m

30S ribosomal protein S8