HL_6OSI_022

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CCGGGUGAAAGCCUGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_022 not in the Motif Atlas

Homologous match to HL_5J7L_022

Geometric discrepancy: 0.5739

The information below is about HL_5J7L_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06285.3

Basepair signature

cWW-cWW-F-F-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6OSI|1|QA|C|1007
6OSI|1|QA|C|1008
6OSI|1|QA|G|1009
6OSI|1|QA|G|1010
6OSI|1|QA|G|1011
6OSI|1|QA|U|1012
6OSI|1|QA|G|1013
6OSI|1|QA|A|1014
6OSI|1|QA|A|1015
6OSI|1|QA|A|1016
6OSI|1|QA|G|1017
6OSI|1|QA|C|1018
6OSI|1|QA|C|1019
6OSI|1|QA|U|1020
6OSI|1|QA|G|1021
6OSI|1|QA|G|1022

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain QS

30S ribosomal protein S19